systemPipeShiny

systemPipeShiny puts a graphical face on the systemPipeR workflow engine, so designing, running, and visualizing an analysis no longer means writing the orchestration code by hand. It runs on a laptop or a shared server and stays extensible for developers who want to bolt on their own modules.

Its modules cover the arc of a project — build and run workflows, explore RNA-seq results, spin up quick ggplot charts from a table, and arrange figures on a Canvas workbench into publication-ready output. Because Shiny is reactive, tweaking a parameter updates the tables and plots instantly, without rerunning upstream steps.

Under the hood it’s modular, resting on three companion packages — spsComps, drawer, and spsUtil — and it earned a runner-up spot in the 2021 global Shiny Contest.